Efficient Combinatorial Group Testing: Bridging the Gap between Union-Free and Disjunctive Codes

Author:

Daniil Goshkoder, Nikita Polyanskii, Ilya Vorobyev

Keyword:

Computer Science, Information Theory, Information Theory (cs.IT)

journal:

date:

2024-01-29 00:00:00

Abstract

This work focuses on non-adaptive group testing, with a primary goal of efficiently identifying a set of at most $d$ defective elements among a given set of elements using the fewest possible number of tests. Non-adaptive combinatorial group testing often employs disjunctive codes and union-free codes. This paper discusses union-free codes with fast decoding (UFFD codes), a recently introduced class of union-free codes that combine the best of both worlds -- the linear complexity decoding of disjunctive codes and the fewest number of tests of union-free codes. In our study, we distinguish two subclasses of these codes -- one subclass, denoted as $(=d)$-UFFD codes, can be used when the number of defectives $d$ is a priori known, whereas $(\le d)$-UFFD codes works for any subset of at most $d$ defectives. Previous studies have established a lower bound on the rate of these codes for $d=2$. Our contribution lies in deriving new lower bounds on the rate for both $(=d)$- and $(\le d)$-UFFD codes for an arbitrary number $d \ge 2$ of defectives. Our results show that for $d\to\infty$, the rate of $(=d)$-UFFD codes is twice as large as the best-known lower bound on the rate of $d$-disjunctive codes. In addition, the rate of $(\le d)$-UFFD code is shown to be better than the known lower bound on the rate of $d$-disjunctive codes for small values of $d$.

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